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ensemblorg/ensembl-vep:release_116.1

Multi-platform
Index digest

sha256:6972667883d89b9fa55e5cbe94f1b4c259ebc6bbd178310cef78f617e055eb75

OS/ARCH

Compressed size

292.3 MB

Last pushed

20 days by likhitha03

Type

Image

Manifest digest

sha256:f799f08d1654f5657dba676e138553b6df945ea3a89626143223e63ad078e22b

Image Layers

Image Layers

1ARG RELEASE0 B
2ARG LAUNCHPAD_BUILD_ARCH0 B
3LABEL org.opencontainers.image.version=22.040 B
4ADD file ... in / 26.34 MB
5CMD ["/bin/bash"]0 B
6RUN /bin/sh -c apt-get update127.76 MB
7ENV OPT=/opt/vep0 B
8ENV OPT_SRC=/opt/vep/src0 B
9ENV PERL5LIB_TMP=:/opt/vep/src/ensembl-vep:/opt/vep/src/ensembl-vep/modules:/plugins0 B
10ENV PERL5LIB=:/opt/vep/src/ensembl-vep:/opt/vep/src/ensembl-vep/modules:/plugins:/opt/vep/src/bioperl-live0 B
11ENV KENT_SRC=/opt/vep/src/kent-335_base/src0 B
12ENV HTSLIB_DIR=/opt/vep/src/htslib0 B
13ENV DEPS=/opt/vep/src0 B
14ENV PATH=/opt/vep/src/ensembl-vep:/opt/vep/src/var_c_code:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin0 B
15ENV LANG_VAR=en_US.UTF-80 B
16ARG BRANCH=release/1160 B
17RUN |1 BRANCH=release/116 /bin/sh -c4.15 KB
18USER vep0 B
19COPY --chown=vep:vep /opt/vep/src /opt/vep/src #13.38 MB
20USER root0 B
21WORKDIR /opt/vep/src/bioperl-ext/Bio/Ext/Align/32 B
22RUN |1 BRANCH=release/116 /bin/sh -c1.22 MB
23WORKDIR /opt/vep/src/ensembl-xs32 B
24RUN |1 BRANCH=release/116 /bin/sh -c460 KB
25WORKDIR /opt/vep/src32 B
26RUN |1 BRANCH=release/116 /bin/sh -c83.98 MB
27ENV LC_ALL=en_US.UTF-80 B
28ENV LANG=en_US.UTF-80 B
29USER vep0 B
30ENV PERL5LIB=:/opt/vep/src/ensembl-vep:/opt/vep/src/ensembl-vep/modules:/plugins0 B
31ENV VEP_NO_UPDATE=10 B
32ENV VEP_NO_HTSLIB=10 B
33ENV VEP_NO_PLUGINS=10 B
34ENV VEP_DIR_PLUGINS=/plugins0 B
35ENV VEP_PLUGINSDIR=/plugins0 B
36WORKDIR /plugins100 B
37WORKDIR /opt/vep/src/ensembl-vep32 B
38RUN |1 BRANCH=release/116 /bin/sh -c5.61 MB
39USER root0 B
40ENV PLUGIN_DEPS=https://raw.githubusercontent.com/Ensembl/VEP_plugins/release/116/config0 B
41RUN |1 BRANCH=release/116 /bin/sh -c24.1 MB
42RUN |1 BRANCH=release/116 /bin/sh -c150 B
43RUN |1 BRANCH=release/116 /bin/sh -c450.2 KB
44RUN |1 BRANCH=release/116 /bin/sh -c1.79 KB
45RUN |1 BRANCH=release/116 /bin/sh -c431.94 KB
46USER vep0 B
47WORKDIR /plugins32 B
48RUN |1 BRANCH=release/116 /bin/sh -c8.59 MB
49ENV PATH=/plugins/GeneSplicer:/opt/vep/src/ensembl-vep:/opt/vep/src/var_c_code:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin0 B
50USER root0 B
51RUN |1 BRANCH=release/116 /bin/sh -c105 B
52USER vep0 B
53WORKDIR /data135 B

Command

 ARG RELEASE